Programming Tutorial

I organized a programming tutorial for scientists with two other members of WINGS-ABC.

Tutorial Webpage

The goal of this tutorial was to introduce a variety of know-how which is very common in expert programmers but not known among scientists. We covered the following topics:

• Sharing the code
• Environment setup (pip, pyenv, pipenv, Docker, VSCode)
• Parameter search and logging (mlflow)
• Version control
• Readability of the code
• Linter, Type checker
• Test, Unit test
• Reproducibility of Jupyter notebook

We also prepared sample codes for a deeper understanding of our tutorial.

• mlflow-demo
• sample_unittest

Project link: https://github.com/WINGS-ABC-programming-tutorial/tutorial-info

• programming